PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022151591.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family MYB
Protein Properties Length: 263aa    MW: 30037.7 Da    PI: 6.9357
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022151591.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.92e-171461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd++l+ +++++G  +W++ ++  g+ R++k+c++rw +yl
   XP_022151591.1 14 KGPWTAEEDQILISYINEHGHSNWRALPKLAGLLRCGKSCRLRWINYL 61
                     79******************************99************97 PP
2Myb_DNA-binding56.18.4e-1867112148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg++T+eE+e  ++++++lG++ W++Ia+ ++ gRt++++k++w+++l
   XP_022151591.1  67 RGNFTQEEQEMVLQLHEKLGNR-WSAIAANLP-GRTDNEIKNFWHTHL 112
                      89********************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
MVRAPCCEKM GLKKGPWTAE EDQILISYIN EHGHSNWRAL PKLAGLLRCG KSCRLRWINY  60
LRPDIKRGNF TQEEQEMVLQ LHEKLGNRWS AIAANLPGRT DNEIKNFWHT HLKKRLVNKQ  120
SHVSERKKSD SAVITGKPKP QKLDCSTYTY HELPSSSLDL SSLTDSPTAA WDGYNEIGNK  180
QYIEVSEAFH QTGGGLWPEE PFDGPIFNSS AANDEKQLQS PFRDVDSMEF GCYYNNDTKM  240
DDSMEFWYRV FVKAGGSPND PAF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23250.11e-74MYB family protein