PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022152048.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family B3
Protein Properties Length: 104aa    MW: 11965.5 Da    PI: 10.1037
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022152048.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3413.3e-136604296
                    TS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEE CS
              B3 42 sgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkv 96
                    ++r+W+++++y  ++ks++y+l+ ++ +Fv+angL+egDf+v++  ++ ++++++++ 
  XP_022152048.1  6 TSRVWNMRYRYwpNNKSRMYLLE-NTGDFVRANGLQEGDFIVIY--SDvKCGKYMIRG 60
                    579********777777777777.********************..566999888875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 104 aa     Download sequence    
MEDIGTSRVW NMRYRYWPNN KSRMYLLENT GDFVRANGLQ EGDFIVIYSD VKCGKYMIRG  60
VKVRQPVPKP ESKRPAKSQK SVQPTATANA NGSSRHPEEE ETKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24650.15e-43B3 family protein