PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022152200.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family LBD
Protein Properties Length: 193aa    MW: 21517.1 Da    PI: 8.8079
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022152200.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260141.82.2e-44241231100
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 
                     +CaaCk+lrrkC +dCv+apyfp e+p+kfanvhk+FGasnv+kll+++++++reda++sl+yeAear++dPvyG+vg i+ lq+q+ +l++el+
  XP_022152200.1  24 PCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELD 118
                     7*********************************************************************************************9 PP

          DUF260  96 llkee 100
                     +++++
  XP_022152200.1 119 ATNAN 123
                     98765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    
MLKQLTERRK NYWKMASSTY SNSPCAACKF LRRKCLPDCV FAPYFPPEEP QKFANVHKIF  60
GASNVSKLLN EVQPHQREDA VNSLAYEAEA RMKDPVYGCV GAISILQRQV IKLQKELDAT  120
NANLIRYACN EIPAPSPSPS SSSQYARRSS STNHEGSSST SSYGHYYSGL YFSPWSNNNG  180
PCGDGHDKGG EYK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G27650.13e-69LBD family protein