PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022152241.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family HSF
Protein Properties Length: 259aa    MW: 29640.4 Da    PI: 8.5808
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022152241.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind111.27.1e-35321232102
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     Fl k+y+ +ed++++++isw+ +g++fvv+++ efak+vLp+ Fkh nf+SFvRQLn+YgF+kv +++         weF +++F+kg+ke+l++
  XP_022152241.1  32 FLVKTYKAVEDPATDDVISWNGDGTAFVVWQTAEFAKDVLPTLFKHCNFSSFVRQLNTYGFRKVATTR---------WEFCNNKFQKGEKEKLCE 117
                     9****************************************************************999.........****************** PP

                     XXXXXX CS
    HSF_DNA-bind  97 ikrkks 102
                     i+r+k 
  XP_022152241.1 118 IRRRKA 123
                     ***985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    
MEAGVSNDRK GSPAAAAEEE SVIMRKSTPP PFLVKTYKAV EDPATDDVIS WNGDGTAFVV  60
WQTAEFAKDV LPTLFKHCNF SSFVRQLNTY GFRKVATTRW EFCNNKFQKG EKEKLCEIRR  120
RKAWTSNKQR VAEASEHHEL DEDQRSSSSN SSSSEYNTLV DQNKRLKEEN GALISELASM  180
KNKCRELLDL VAKCGKKSSK EEEVDERPKL FGVRLEVEGE RERKRKRGEN NQEINETATF  240
LLSQSCKMKV KEEKAIIRF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1223251RKRKRGENNQEINETATFLLSQSCKMKVK
2224252RKRKRGENNQEINETATFLLSQSCKMKVK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41690.11e-62HSF family protein