PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022152282.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family ARR-B
Protein Properties Length: 601aa    MW: 67982 Da    PI: 6.7005
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022152282.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like43.85.7e-14247295454
         G2-like   4 lrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYR 54 
                     l W+ e H++F  a+++LG  ++  Pk il++m+ ++Ltl +v+ HLQk++
  XP_022152282.1 247 LLWNAERHRKFTYALNKLG--DRSRPKLILKMMNEPCLTLRQVANHLQKHK 295
                     67****************5..7899************************86 PP
2Myb_DNA-binding23.81.1e-07249295448
                      S-HHHHHHHHHHHHHTTTT.-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   4 WTteEdellvdavkqlGgg.tWktIartmg.kgRtlkqcksrwqkyl 48 
                      W +e + ++  a ++lG + ++k+I ++m+   +tl q+ +++qk++
   XP_022152282.1 249 WNAERHRKFTYALNKLGDRsRPKLILKMMNePCLTLRQVANHLQKHK 295
                      99999**************************999***********96 PP
3Response_reg39.23.6e-14181241107
                     EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS
    Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 
                     +l+vd +pl ++ ++++le++ y +v+++++++ al +++ek   +Dl++   +mp+md + +l  + +++  +  +++++ +  + a++    G
  XP_022152282.1  18 ILVVDHDPLSLMQMASLLEQQFY-KVTTTQQASVALSMIEEKGdrFDLVMANASMPDMDKFSFLHALLKKNIAVISVMLSGMN-LDVATKPSAGG 110
                     89*****************9999.***************888888**********************7766455555555333.67999999999 PP

                     ESEEEESS--HHHH CS
    Response_reg  94 akdflsKpfdpeel 107
                      + fl +p+++++l
  XP_022152282.1 111 KSYFLQNPISKDDL 124
                     999******99998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 601 aa     Download sequence    
MGYWVTDYLP RLDKNLNILV VDHDPLSLMQ MASLLEQQFY KVTTTQQASV ALSMIEEKGD  60
RFDLVMANAS MPDMDKFSFL HALLKKNIAV ISVMLSGMNL DVATKPSAGG KSYFLQNPIS  120
KDDLKYVWQH IYHRNINVTK LAQKVNFIEK SKSGGIKIAD TIDLSGSDAN NNSYINYQPT  180
NYKGKERTKQ TEYQDGLVGS NFGGRRSSHD IEGTIKEKRI KFGSQRIDKD HERRNEYYIP  240
SDGRSCLLWN AERHRKFTYA LNKLGDRSRP KLILKMMNEP CLTLRQVANH LQKHKAQVEC  300
IKRRRENKLA FKGETSKSNS SARTQLSPLL QKQHHKMRRI RDGSARSTCF LGGDKLRPIV  360
PKTQPIPGLP VSNFANCGLG MLNHNFQQVD SYLNYNSIPF NNNKEVGLYP YNIQTFEKEA  420
GNVLCSDVSE KFALVGEEVQ ISELNFPNVS TMASEVACSR IFDEIQLPDN LLDVVDHQLY  480
LSASEIENQK AMECSGISKE IPSPFREITV PDSNNVAPDF IDWEPELPTT FGNEGSQPLT  540
EYADMILNVL EDDPYNLGSD LSLSDVDKYC EWLRSTVLED GSSPNNFICD NAEKVPIGNA  600
Q
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68210.12e-35ARR-B family protein