PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022152404.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

Trihelix

Protein Properties

Length: 376aa MW: 41454.3 Da PI: 10.2746

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022152404.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	51.9	2e-16	69	156	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W++ + +Li+a e+ +l+rg+lk+++W+ev++ + +++ r+ +qCk++++ ++k+yk +k+ + + ++ s++p+fd+l+ XP_022152404.1 69 CWSEGATSVLIDAWGERYLELSRGNLKQKHWKEVADIVssreDYTKIPRTDIQCKNRIDTVKKKYKTEKAKIIAG--GAPSKWPFFDRLD 156 7***********************************87666677899********************97..67778****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 376 aa Download sequence
MKEDDEIQSY PSPGSGSPDS PMSNGRITVT VAAAAPPPPP SSQGTITLAL PNQQSKGGGG 60 GGGGGREDCW SEGATSVLID AWGERYLELS RGNLKQKHWK EVADIVSSRE DYTKIPRTDI 120 QCKNRIDTVK KKYKTEKAKI IAGGAPSKWP FFDRLDQLIG PASKNPVSSA GLATAVNPPL 180 QQNQKVPLGI PVVNRSVNPY HNHQQQQQQQ QQKGSKAQKI QLHKRPRTDS DSSASERETS 240 PTSSDSFLPE NFRRKNVRVQ KEVVNPNVGQ VGKVVKGRNG SREKGWGNAV NELTQAILKF 300 GEAYEQAESS KLQQVVEMEK QRMKFAKDLE LQRMQFFMKT QLEISQLKHG RRVVAAVNHH 360 HCSNNNNNNS NSDSSN

Sequence ? help Back to Top

Protein Sequence Length: 376 aa Download sequence

MKEDDEIQSY PSPGSGSPDS PMSNGRITVT VAAAAPPPPP SSQGTITLAL PNQQSKGGGG  60
GGGGGREDCW SEGATSVLID AWGERYLELS RGNLKQKHWK EVADIVSSRE DYTKIPRTDI  120
QCKNRIDTVK KKYKTEKAKI IAGGAPSKWP FFDRLDQLIG PASKNPVSSA GLATAVNPPL  180
QQNQKVPLGI PVVNRSVNPY HNHQQQQQQQ QQKGSKAQKI QLHKRPRTDS DSSASERETS  240
PTSSDSFLPE NFRRKNVRVQ KEVVNPNVGQ VGKVVKGRNG SREKGWGNAV NELTQAILKF  300
GEAYEQAESS KLQQVVEMEK QRMKFAKDLE LQRMQFFMKT QLEISQLKHG RRVVAAVNHH  360
HCSNNNNNNS NSDSSN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	56	66	KGGGGGGGGGR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G14180.1	5e-86	Trihelix family protein