PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022152689.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

GRF

Protein Properties

Length: 350aa MW: 38939.1 Da PI: 7.2812

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022152689.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	79.3	3.7e-25	76	119	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCs+++++++k+CErH+hrgr+rsrk++e XP_022152689.1 76 DPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVE 119 79***************************************997 PP
2	QLQ	61.7	2e-21	10	45	1	36
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36 s+FTa+Q+q+L++Q+l++Ky+++++P+Pp+L++ ++ XP_022152689.1 10 SPFTATQWQELEHQALIFKYMVSGVPIPPDLIFSVK 45 89******************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 350 aa Download sequence
MNSSPKACTS PFTATQWQEL EHQALIFKYM VSGVPIPPDL IFSVKRSLDS SISARLFPHQ 60 PIGWGCFEMG FGRKADPEPG RCRRTDGKKW RCSKEAYPDS KYCERHMHRG RNRSRKPVEI 120 SSTPSTQTQP PPPLILTSNR SLSSSSTPTT SSYSLSTLSS SSSSLTCETQ SYHQAAAAYH 180 ESSIHPFLYP QSSSSRPPCS DFSPINTNPQ LFLYSGTAQA GKDYSRDMDG PREGVGVQSF 240 FPSIADSARS LAEVYNQPMA MDSYKQSVSQ SHQIYSSKQA RHQQEQHCFV LGTDFNKPSR 300 SAKTEEEEEE DAETQKPLLH FFEDCPPKNS DSWLDLASSS SIQSGNFIGL

Sequence ? help Back to Top

Protein Sequence Length: 350 aa Download sequence

MNSSPKACTS PFTATQWQEL EHQALIFKYM VSGVPIPPDL IFSVKRSLDS SISARLFPHQ  60
PIGWGCFEMG FGRKADPEPG RCRRTDGKKW RCSKEAYPDS KYCERHMHRG RNRSRKPVEI  120
SSTPSTQTQP PPPLILTSNR SLSSSSTPTT SSYSLSTLSS SSSSLTCETQ SYHQAAAAYH  180
ESSIHPFLYP QSSSSRPPCS DFSPINTNPQ LFLYSGTAQA GKDYSRDMDG PREGVGVQSF  240
FPSIADSARS LAEVYNQPMA MDSYKQSVSQ SHQIYSSKQA RHQQEQHCFV LGTDFNKPSR  300
SAKTEEEEEE DAETQKPLLH FFEDCPPKNS DSWLDLASSS SIQSGNFIGL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	1e-65	GRF family protein