PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022152694.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

HD-ZIP

Protein Properties

Length: 249aa MW: 27918.5 Da PI: 7.8816

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022152694.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	55	1.4e-17	121	175	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++++eq Lee F++++ + +++ eLAk+l+L rqV vWFqNrRa+ k XP_022152694.1 121 RKKLRLSREQSAFLEESFKEHHSLYPKQKVELAKRLNLRPRQVEVWFQNRRARTK 175 677889***********************************************98 PP
2	HD-ZIP_I/II	116.8	1.3e-37	121	210	1	91
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 +kk+rls+eq+++LEesF+e++ L p++Kvela++L+l+prqv+vWFqnrRARtk+kq+E+++e+Lk+++++l+++n++L ke ++L+ +l XP_022152694.1 121 RKKLRLSREQSAFLEESFKEHHSLYPKQKVELAKRLNLRPRQVEVWFQNRRARTKLKQTEEECEYLKKWCETLSQHNTKLLKELTDLK-AL 210 69************************************************************************************99.55 PP

Sequence ? help Back to Top
Protein Sequence Length: 249 aa Download sequence
MELGLRLGDG SPFGFPKTQN KHPPHPTVSR RGLDFCLVDA NDVVGCFFGP PPPPQLDLLL 60 PRTPLASRPS SETDVSEAAA AEGGGNPLLS ASLEYGGRAA ATRPENSSGD EEEEEQNLGL 120 RKKLRLSREQ SAFLEESFKE HHSLYPKQKV ELAKRLNLRP RQVEVWFQNR RARTKLKQTE 180 EECEYLKKWC ETLSQHNTKL LKELTDLKAL KTTDSLFFHL PPTTLTICTS CQRAAGKHLA 240 DESHAHRTQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	170	178	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06710.1	4e-53	HD-ZIP family protein