PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022152695.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

HD-ZIP

Protein Properties

Length: 174aa MW: 19381.8 Da PI: 7.5811

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022152695.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	55.8	7.9e-18	121	174	2	55
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRake 55 rk+ ++++eq Lee F++++ + +++ eLAk+l+L rqV vWFqNrRa++ XP_022152695.1 121 RKKLRLSREQSAFLEESFKEHHSLYPKQKVELAKRLNLRPRQVEVWFQNRRARW 174 677889***********************************************9 PP
2	HD-ZIP_I/II	80.4	2.8e-26	121	174	1	54
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARt 54 +kk+rls+eq+++LEesF+e++ L p++Kvela++L+l+prqv+vWFqnrRAR+ XP_022152695.1 121 RKKLRLSREQSAFLEESFKEHHSLYPKQKVELAKRLNLRPRQVEVWFQNRRARW 174 69***************************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 174 aa Download sequence
MELGLRLGDG SPFGFPKTQN KHPPHPTVSR RGLDFCLVDA NDVVGCFFGP PPPPQLDLLL 60 PRTPLASRPS SETDVSEAAA AEGGGNPLLS ASLEYGGRAA ATRPENSSGD EEEEEQNLGL 120 RKKLRLSREQ SAFLEESFKE HHSLYPKQKV ELAKRLNLRP RQVEVWFQNR RARW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06710.1	4e-26	HD-ZIP family protein