PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022152697.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family MYB_related
Protein Properties Length: 274aa    MW: 30892.7 Da    PI: 4.8139
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022152697.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding51.13e-163074147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     rg+++++E+el+v+++ + G++ W+ Ia++++ gRt++++k++w++ 
   XP_022152697.1 30 RGAFSPQEEELIVHLHSLIGNR-WSQIASRLP-GRTDNEIKNFWNST 74
                     89********************.*********.***********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    
SDIARNAGLQ RCGKSCRLRW INYLRPDLKR GAFSPQEEEL IVHLHSLIGN RWSQIASRLP  60
GRTDNEIKNF WNSTLKKRLK NNISSSPFNS HESSDPRLDM MFGGLMSMQE HDIVSMNMSM  120
DSSSTSSSSS QLPVSITGHN SFDAPTMPFL DNNFELAGAA NGFLQAPGGR LAEVGMGMEM  180
RMEERFSYGS LEAQRSMEME RDVACLPHEE MNCPLMNSRG NFDQYLGTNE QNLNVEEIFG  240
DMGSHGQLQE SLKMGNEWDL ESFMQDIPSF PNFL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12870.11e-48MYB family protein