PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022152852.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MYB

Protein Properties

Length: 333aa MW: 37650.1 Da PI: 7.5178

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022152852.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	47.3	4.8e-15	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l+d +++ G+g +W + + + g++R++k+c++rw++yl XP_022152852.1 14 KGPWSPEEDAKLKDFIHKNGTGgNWIALPLKAGLKRCGKSCRLRWLNYL 62 79*********************************************97 PP
2	Myb_DNA-binding	40.8	5.1e-13	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +T+eEd ++ ++ G++ W+ Ia ++ gRt++++k++w++ XP_022152852.1 69 GGFTEEEDRIICTLFSTIGSR-WSIIATQLP-GRTDNDIKNHWNS 111 569****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 333 aa Download sequence
MGRSPCCDKA NVKKGPWSPE EDAKLKDFIH KNGTGGNWIA LPLKAGLKRC GKSCRLRWLN 60 YLRPNIKHGG FTEEEDRIIC TLFSTIGSRW SIIATQLPGR TDNDIKNHWN SKLKKKLMGR 120 STMEEKKPQI MSILPNSHQQ ASPFPLSHDQ PLQSLICKDF NVNYNYNLSP PPQGIDQTLI 180 SIPSTNWSNH FQSNNGQTLS CLFQQAQESC CLMHHNHHHE YPPQAKERLL GFGRSEGSCS 240 SSDGSSTQIS SSGIMGFHQN QGYDSNYCNV FGEELQQQQP LWNCDVEEDV HNDNGFFQVL 300 LFLIHGEREP VQEGDSSTSQ ASAGERYRVR GQW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57620.1	4e-75	MYB family protein