PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022152961.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family NF-YB
Protein Properties Length: 164aa    MW: 18701.6 Da    PI: 4.417
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022152961.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB41.24e-1310102693
           NF-YB   6 rflPianvsrimkkvlPa...nakiskdaketv..qecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrel 93 
                     ++lP + v r++k+ l +   n  is +   ++   e +  fi ++++ ++d c++ kr+ti++dd+l al ++ f + v plk+ l+++r  
  XP_022152961.1  10 EELPKTIVRRVVKEKLSQcsrNQDISVNKDSLLafCESARIFIHYLSATSNDICKESKRQTIKADDVLKALEDMEFPELVRPLKASLNEFRRK 102
                     5789999999*999997522255666555555500566678*************************************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 164 aa     Download sequence    
MEKKVAAEIE ELPKTIVRRV VKEKLSQCSR NQDISVNKDS LLAFCESARI FIHYLSATSN  60
DICKESKRQT IKADDVLKAL EDMEFPELVR PLKASLNEFR RKSAGKKAAA SREKEAKKKR  120
KIEEPTVEDE SKDDVGNDDN DNDHDEDEDE VEDEDEEENG ASDE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1100121RRKSAGKKAAASREKEAKKKRK
2112121REKEAKKKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G27470.12e-40NF-YB family protein