PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022153005.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family NAC
Protein Properties Length: 202aa    MW: 23731.3 Da    PI: 9.0539
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022153005.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM137.96.5e-43271591127
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratk..sgyWkatgkd 89 
                     l pGfrF Pt+eel+++yL+++++g++ e+++vi+ ++iy++eP +L +    +++ e+++w+fF+k++ ++a+g r+nr+t+  sgyWkatg+ 
  XP_022153005.1  27 LLPGFRFFPTEEELISFYLHNQLQGRRREIHRVIPVLBIYSIEPFNLSRysgeRCRREREQWFFFVKQQDREARGGRPNRTTSsgSGYWKATGSP 121
                     579***************************99***************8445665566778********************8876689******** PP

             NAM  90 kevlskkgelvglkktLvfykgrapkgektdWvmheyr 127
                       v+s++++++glkkt+vfykg+ap+g+kt+W m+ey+
  XP_022153005.1 122 GYVYSSDNRVIGLKKTMVFYKGKAPTGTKTKWKMNEYK 159
                     *************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    
MIEEEFNFLL ITMDEVVRGE EEAAQELLPG FRFFPTEEEL ISFYLHNQLQ GRRREIHRVI  60
PVLBIYSIEP FNLSRYSGER CRREREQWFF FVKQQDREAR GGRPNRTTSS GSGYWKATGS  120
PGYVYSSDNR VIGLKKTMVF YKGKAPTGTK TKWKMNEYKA IQDHQTSSSS TPELRHEFSL  180
CRIYVVSGSF RAFDRRPLEV CN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22380.11e-84NAC family protein