PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022153024.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family MYB_related
Protein Properties Length: 354aa    MW: 38709.4 Da    PI: 7.0363
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022153024.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding41.92.3e-13112156347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ l++ + ++lG+g+W+ I+r +  +Rt+ q+ s+ qky
   XP_022153024.1 112 PWTEEEHRLFLVGLQKLGKGDWRGISRNFVITRTPTQVASHAQKY 156
                      8*****************************99************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 354 aa     Download sequence    
MTRRCSHCSN NGHNSRTCPS RGGRTGSGSL GAGGGGVKLF GVRLTDGSFI KKSASMGNLS  60
AHYHSSSSAA ASPNPDSPNS DPVHDTDGFL SDDPAHASCS ANRRGERKKG VPWTEEEHRL  120
FLVGLQKLGK GDWRGISRNF VITRTPTQVA SHAQKYFIRQ SNATRRKRRS SLFDMVPEMA  180
TDPLPVPEDE VLHAAQTKET ENSSSQPSLN LSLNSEFQMM ETTVEENGKE LDAPKMEISG  240
FPPMIPGFIP AYMPVPFSIW APGTVPMEEE KGMETCHHEV LKPIPVVPKE PVNVDELVGM  300
SQLTLREHER EHGEPSPLSL KLIGEPSRQS AFHPNAPVSR SELSKDNNEK IQAL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16350.11e-89MYB_related family protein