PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022153076.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family YABBY
Protein Properties Length: 169aa    MW: 18880.4 Da    PI: 9.4479
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022153076.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY237.72.6e-7361605170
           YABBY   5 ssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvsse 99 
                      +se+vCyv+CnfCntilavsvP +s+f++vtvrCGhC++llsvn+  + q+++ ++  +       + +++++ +++    +++ s+s++ s+ 
  XP_022153076.1   6 MASERVCYVHCNFCNTILAVSVPCNSMFTLVTVRCGHCSNLLSVNMGASLQVVPPQDSSQ-------QGHKQQQVSSTGDSSKERGSSSSKCSK- 92 
                     689***************************************************999722.......222222222333333333333333333. PP

           YABBY 100 klsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170
                      + ++ +++  r+pp irPPekrqrvPsaynrfikeeiqrika+nPdishreafs+aaknWahfP+ihfgl
  XP_022153076.1  93 -I-DSAERDQHRIPP-IRPPEKRQRVPSAYNRFIKEEIQRIKAKNPDISHREAFSTAAKNWAHFPHIHFGL 160
                     .2.344555566777.9****************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 169 aa     Download sequence    
MSLDMMASER VCYVHCNFCN TILAVSVPCN SMFTLVTVRC GHCSNLLSVN MGASLQVVPP  60
QDSSQQGHKQ QQVSSTGDSS KERGSSSSKC SKIDSAERDQ HRIPPIRPPE KRQRVPSAYN  120
RFIKEEIQRI KAKNPDISHR EAFSTAAKNW AHFPHIHFGL KLDGNKQSN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08465.14e-71YABBY family protein