PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022153244.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family SRS
Protein Properties Length: 118aa    MW: 11797 Da    PI: 6.2286
Description SRS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022153244.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF70273.46.9e-2356795154
          DUF702  95 eskkeletsslPeevsseavfrcvrvssvdd...geeelaYqtavsigGhvfkGiLydqGlee 154
                      + ++ ++++lP++v+++avf+cvrv++v+    g +e+aYq++v igGhvfkG+Lyd+G+e+
  XP_022153244.1   5 AADMSCKKAKLPDQVRAPAVFKCVRVTAVEGgggGGNEYAYQAVVRIGGHVFKGYLYDHGVEA 67 
                     5567788889********************8555679***********************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 118 aa     Download sequence    
NGNAAADMSC KKAKLPDQVR APAVFKCVRV TAVEGGGGGG NEYAYQAVVR IGGHVFKGYL  60
YDHGVEARDG FPMFSDLHLG GGGDGGSTSS PAVDPTDVYV SSGGGGLAGG SSYGNPIN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12330.17e-28SRS family protein