PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022153257.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family bHLH
Protein Properties Length: 425aa    MW: 46846 Da    PI: 7.5404
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022153257.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.52e-12360405655
                     HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +++Er RR ri +++ +L+el P      +k  s a++Le+AveYIk Lq
  XP_022153257.1 360 SIAERMRRTRISERMKKLQELFPDM----DKQTSTADMLELAVEYIKGLQ 405
                     689*********************7....688*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 425 aa     Download sequence    
MSLLYSTNFK FSNDEMKKYP DFMDCDTNPN HPPQDHHNSG GLLGYCSAPT SLFASLVDGA  60
EGLNSSENGG GDGGGREDYR LVRSSSPEVE VILSRFMASC NGTVDSGSQG LGETVVKQET  120
VESIHQQNGY RNQSSSSSSS SMVNSAAGAR IGNSFSVMNS SDFGNSMQLQ LGARNCSNLF  180
RQNSSPAGFF SHLTAENGCN TTRDVEKFGT CNRKDADAAY PLTTRIGNQL NLSGQSFGSS  240
HMPPIAEEEN KSMDVVSSSH HRIQKVDRLH TDDFLNSSWD ESAMRDLKRG RDNNGRTFST  300
SIMLETKNTD SRNSIRGLSH HLSLPINFAD KAPVENFLTF QDPVPHQIRA KRGCATHPRS  360
IAERMRRTRI SERMKKLQEL FPDMDKQTST ADMLELAVEY IKGLQRKVKT LTDTKARCTC  420
LCSSK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42280.19e-52bHLH family protein