PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022153349.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MYB

Protein Properties

Length: 253aa MW: 27942.5 Da PI: 7.3373

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022153349.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.7	2e-16	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEde+l+ +++ +G+g +W + ++++g++R++k+c++rw++yl XP_022153349.1 14 KGAWSAEEDEKLKAYIQHYGTGgNWIALPNKIGLKRCGKSCRLRWLNYL 62 79*********************************************97 PP
2	Myb_DNA-binding	40.4	6.7e-13	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +++eEd ++ +++ G++ W+ Ia+ ++ gRt++++k++w++ XP_022153349.1 69 GGFSQEEDNIICNLFISIGTR-WSIIAAQLP-GRTDNDVKNYWNT 111 569****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 253 aa Download sequence
MGRAACCDKD KVKKGAWSAE EDEKLKAYIQ HYGTGGNWIA LPNKIGLKRC GKSCRLRWLN 60 YLKPNIKHGG FSQEEDNIIC NLFISIGTRW SIIAAQLPGR TDNDVKNYWN TKLKKKLLGT 120 PKHSSNVNKL PSNSNSTMER LQLQMQLQGL HNSYSVYNAA ALWPTVSTGE EAKVVTGQLP 180 TSTGGKSLMG SSSGEEDGGA IEIDNVKEMD DSKESLVWWC DDFDAKSAAA LDLWNTNSTE 240 GIFQDCELLG YGL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57620.1	3e-77	MYB family protein