PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022153468.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family C2H2
Protein Properties Length: 273aa    MW: 29178.6 Da    PI: 7.9752
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022153468.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.50.0002290112123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C++C + F ++  L  H++ H
  XP_022153468.1  90 FSCNYCQRKFYSSQALGGHQNAH 112
                     89*****************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    
MDLPTSELSP SETSTIISTS ESSPPCPKPP PENGDPKADQ LNPNSELGLD LSLCNDDSHH  60
GSNPELNLID CFHSNLAESA AAGETEPRVF SCNYCQRKFY SSQALGGHQN AHKRERTLAK  120
RTQRVGSGSN FGLAHRYSSM ASLPLHGSFS RSLGIQAHSM IHKPSFDVSG IGSSGIYGHG  180
SGWARQPLGQ QPAIGRLVQQ GISHVGGLRG ISSNTGAARF EGVKKFSPPT PMPTPPTQQV  240
GEFWWDGGGG GFSHLKVKAK QEELLKLDLS LKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10970.16e-42C2H2 family protein