PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022153490.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MYB

Protein Properties

Length: 195aa MW: 22505.3 Da PI: 7.9508

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022153490.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	66.1	6.3e-21	30	77	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+++++ +G ++WktIa++ g++R++k+c++rw++yl XP_022153490.1 30 KGAWTAEEDQKLAEVIAIHGAKRWKTIAAKAGLNRCGKSCRLRWLNYL 77 79********************************************97 PP
2	Myb_DNA-binding	50.8	3.7e-16	83	128	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ + +E++l+++++k+lG++ W++Ia +++ gRt++++k++w+++l XP_022153490.1 83 RGNISDQEEDLILRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNSHL 128 78999***************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 195 aa Download sequence
MTEEESVKRK VKQVEGDINE AENMRNGVNK GAWTAEEDQK LAEVIAIHGA KRWKTIAAKA 60 GLNRCGKSCR LRWLNYLRPN IKRGNISDQE EDLILRLHKL LGNRWSLIAG RLPGRTDNEI 120 KNYWNSHLSK KINQQSEKES EVLKRKGCKR KVDTESREEE TSQECGDGSN LEFDVDNLFD 180 FSNEGPDLEW MSKFL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G40330.1	3e-54	MYB family protein