PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022153715.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MYB

Protein Properties

Length: 183aa MW: 20808.5 Da PI: 10.8991

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022153715.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.3	7.4e-18	17	62	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ede+l ++v+q+G ++W++Ia++++ gR++k+c++rw++ XP_022153715.1 17 RGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQ-GRSGKSCRLRWFNQ 62 899***************************.*********996 PP
2	Myb_DNA-binding	59.4	8.1e-19	69	112	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r ++++eE+e+l a++ +G++ W++Iar ++ gRt++ +k++w+ XP_022153715.1 69 RRPFSEEEEERLMAAHRIHGNK-WALIARLLP-GRTDNAVKNHWHV 112 679*****************.*****.*********85 PP

Sequence ? help Back to Top
Protein Sequence Length: 183 aa Download sequence
MDAAASTPGD DGKSSPRGHW RPAEDEKLQR LVQQFGARNW NSIAEKLQGR SGKSCRLRWF 60 NQLDPRINRR PFSEEEEERL MAAHRIHGNK WALIARLLPG RTDNAVKNHW HVIIARKHRQ 120 HFKIHGGGRF PYGPTTAGVF FRQKSAIILN ADIKRDEESA DPKDIVPFID FLGVGISSST 180 PNK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G17950.1	8e-62	MYB family protein