PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022153926.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family bHLH
Protein Properties Length: 254aa    MW: 28141.9 Da    PI: 6.5871
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022153926.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH44.33.3e-1479131155
                     CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     ++ +hn+ Er RR++iNs ++ Lr llP+a   + kKls  ++  +   YI +Lq
  XP_022153926.1  79 KKLSHNASERDRRKKINSLYSSLRALLPSA--DQMKKLSNPATISRILSYIPELQ 131
                     6789*************************6..49999***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    
MLAVSSPLFS PHQWPLEDPI SLNHHHNSLF PPIEASDSFH LHQFAPPPPL QPPPFELDHY  60
PSSTTPSPGG SATVSKMAKK LSHNASERDR RKKINSLYSS LRALLPSADQ MKKLSNPATI  120
SRILSYIPEL QQQVEGLMRK KEELMGAMTG QEVEGGEERK AKKCAASSSS SVISASRVSQ  180
QEMAVQISTD INDGHRNSLS EILVWLEEEG LSLLNASSFE TFDGKVFHNL HVQMESSCRM  240
EPEMLSNKLL GMFP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.13e-36bHLH family protein