PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022153984.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

HB-other

Protein Properties

Length: 1063aa MW: 117573 Da PI: 9.2792

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022153984.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	17.3	7.9e-06	69	125	1	57
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +r+R ++++ ++ ++++F + +s++e +e+++ g++ +qV+ +F +R + +k XP_022153984.1 69 KRPRDLLNPKAVKYMQTVFSIKDALSKKESREISALFGVKVTQVRDFFNSQRSRVRK 125 799**************************************************9997 PP

Sequence ? help Back to Top
Protein Sequence Length: 1063 aa Download sequence
MEVLKDDFSN LEIGTSVESF QNFLDSQKDL FRSQVDQLQR IVVTQCRLTG VNPLSQEMAA 60 GALSITIGKR PRDLLNPKAV KYMQTVFSIK DALSKKESRE ISALFGVKVT QVRDFFNSQR 120 SRVRKIVRLS REKSIQSNSC KELEVGGIAT NSDPGIPIDA VPLNSDAVVP FNSDAPIPLN 180 SEAPVPLNVD TPVPLNTIEP SNVDNGPSCS TQDSDLFGID GIDRHFVQTI FSLMQKEETF 240 SGQVKLMEWI LQIQNSSVLC WFLTKGGAII LATWLSQAAV EEQTSLLHVV LEVFCHLPLH 300 KALPVHISAI LQSVNNLRFY RNSDISNRAR FLLSRWSKLL TRSQALKKPN GMKLLTNSQT 360 EMILKQSIGD FMCEESWKSN IDMPENFVSP NVNVDNTRKL ESNHALKLLP ASSDDLNRKN 420 VLSLSSSRFR ERRKVQMVEQ PGQKVAGRNS QAPRASPASQ GRPMSTDDIQ KAKMRAQFMQ 480 SKYGKAGSPN GRSDVKSENV NKPLHLVSGA SSPASKISLS LKLEDQRKAL VPPPKSSNKV 540 ETPLHSKVEV EFKDSLGEKC KRVQIQWRMP PEMKLNDLWS VGAGENSKEA GFQKNRNSRE 600 KETLYQTIHD IPSNPKEPWD LEMDYDDSLT PEILTEQLPD NETSETEVRN HAVDTAVPSE 660 MTSSQDLKPT AAEPDLELLA VLLKNPDLVY ALTSGQAGNL PAEDTVKLLD MIKAGGAANM 720 GGGSSVGVGV NRMEKTGEKV EVSLPSPTPS SNAGTSGWKP AVFKNPFSQR DSISESSRGA 780 LASPPVDTSS IAVSRIPANQ QLAAMPPLSH QLPSSVPQLS LPQTPIDGLQ PHHLVHSHHQ 840 GIVANFPGVQ LLNSETASAL RSFPITNIPL ANQSTVAAPS SVRIEGGNVA KPVSFSSNTP 900 ERVISIPFQS PPSPTPTRML LNPMQQQRQS QLQQLQPFQS EHLHQTRVNI EKSAPSLGSW 960 RPRQQDTGSH QNNERKLVGG PSWGRNEFES WSPENSPVRP QPQPQEYSRP DKSFSEPRIN 1020 SGRSYGPAEQ HRHSQSQRSP YGYREQNRHG GNNSSRRWRD RQY

Sequence ? help Back to Top

Protein Sequence Length: 1063 aa Download sequence

MEVLKDDFSN LEIGTSVESF QNFLDSQKDL FRSQVDQLQR IVVTQCRLTG VNPLSQEMAA  60
GALSITIGKR PRDLLNPKAV KYMQTVFSIK DALSKKESRE ISALFGVKVT QVRDFFNSQR  120
SRVRKIVRLS REKSIQSNSC KELEVGGIAT NSDPGIPIDA VPLNSDAVVP FNSDAPIPLN  180
SEAPVPLNVD TPVPLNTIEP SNVDNGPSCS TQDSDLFGID GIDRHFVQTI FSLMQKEETF  240
SGQVKLMEWI LQIQNSSVLC WFLTKGGAII LATWLSQAAV EEQTSLLHVV LEVFCHLPLH  300
KALPVHISAI LQSVNNLRFY RNSDISNRAR FLLSRWSKLL TRSQALKKPN GMKLLTNSQT  360
EMILKQSIGD FMCEESWKSN IDMPENFVSP NVNVDNTRKL ESNHALKLLP ASSDDLNRKN  420
VLSLSSSRFR ERRKVQMVEQ PGQKVAGRNS QAPRASPASQ GRPMSTDDIQ KAKMRAQFMQ  480
SKYGKAGSPN GRSDVKSENV NKPLHLVSGA SSPASKISLS LKLEDQRKAL VPPPKSSNKV  540
ETPLHSKVEV EFKDSLGEKC KRVQIQWRMP PEMKLNDLWS VGAGENSKEA GFQKNRNSRE  600
KETLYQTIHD IPSNPKEPWD LEMDYDDSLT PEILTEQLPD NETSETEVRN HAVDTAVPSE  660
MTSSQDLKPT AAEPDLELLA VLLKNPDLVY ALTSGQAGNL PAEDTVKLLD MIKAGGAANM  720
GGGSSVGVGV NRMEKTGEKV EVSLPSPTPS SNAGTSGWKP AVFKNPFSQR DSISESSRGA  780
LASPPVDTSS IAVSRIPANQ QLAAMPPLSH QLPSSVPQLS LPQTPIDGLQ PHHLVHSHHQ  840
GIVANFPGVQ LLNSETASAL RSFPITNIPL ANQSTVAAPS SVRIEGGNVA KPVSFSSNTP  900
ERVISIPFQS PPSPTPTRML LNPMQQQRQS QLQQLQPFQS EHLHQTRVNI EKSAPSLGSW  960
RPRQQDTGSH QNNERKLVGG PSWGRNEFES WSPENSPVRP QPQPQEYSRP DKSFSEPRIN  1020
SGRSYGPAEQ HRHSQSQRSP YGYREQNRHG GNNSSRRWRD RQY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G02560.2	0.0	HB-other family protein