PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022154013.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family GRAS
Protein Properties Length: 775aa    MW: 85379.6 Da    PI: 5.5051
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022154013.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS332.86.3e-1024137742374
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                      ++L+++Ae v +g+++ aq +Larl+++ sp g+p+qR+a+yf+eAL+  l+   ++ ++  pp+  ++ +++ ++ a+k+fse+sP+++f ++
  XP_022154013.1 413 LDQLYKAAELVGTGNFSHAQGILARLNHQLSPVGKPLQRAAFYFKEALQLLLLM--NNPVNPPPPRCPTPFDVIFKMGAYKVFSEISPLIQFVNF 505
                     679*************************************************98..6667788888888999*********************** PP

            GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledlel 191
                     t+Nqa+lea++ ++++Hi+Dfdi+ G+QW++++q+L+ R++g+psl+iT+++sp++++  el  ++e+L++fA+ +g++fef+v+   ++++l+ 
  XP_022154013.1 506 TCNQALLEALDDDDQIHIVDFDIGFGAQWASFMQELSLRNRGAPSLKITAFASPSTHHPIELGLMRENLTQFANDIGISFEFEVV---NFDSLNQ 597
                     ************************************************************************************8...5555554 PP

            GRAS 192 eeL..rvkp...gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpresee 281
                     +++   +++   +EalaVn+ l   ++ ++++ l+s    +L+++k+lsPk+vv  ++ +d+++ +F +++l+al+ y  l++sl+a    +s++
  XP_022154013.1 598 NSFslPFSRaseNEALAVNFPL--WSTSNQPALLPS----LLRFIKQLSPKIVVSLDRGCDRSDLPFPQHLLQALQSYINLLESLDAV-NMNSDA 685
                     444223333455********99..566667787777....*********************************************776.6799** PP

            GRAS 282 rikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                      +k+Er+ll+++i++ v  + +      e++  W+  + +aG++pv++s+++++qa+++ ++++++g++ve++++slvl+W++r+L+s+SaWr
  XP_022154013.1 686 VNKIERFLLQPRIESTVLGRLRG----PERMPLWKTLFASAGYTPVTFSNFTETQAECVAKRTSVRGFHVEKRQASLVLCWQRRELISASAWR 774
                     ******************99988....9999*************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 775 aa     Download sequence    
MRGSISFHFQ GKKKGEFEIS PSSPICSGFA EKWVKKGQKQ EIEDKEEEEE EGVSYFLLPN  60
NEPTSVLHMR SPSPPTSAST LSSSFGGGGG ALTENTGGCV PSLPPETPAT SGIEPLAGGT  120
AIFSGALERC GVGLEDLESM WSETAGPEQS FLRWIAGDVE DPTLGIKNLL QNGNLGFDFE  180
GNAGIGIVDQ GSEFDPGSGN VLANINPNLS FPLPVCTGFS DVNGNKSLSR SSCGVVNYKS  240
SSLGMNNRHG NFNVQSPMFS GSVENLVVPV SGMVYPQQLQ PFESLDEKPQ NLNPQVMMNQ  300
HQQPQNPSFF VPLMFGQQEQ QQQLQQPQLK RHNSSGVDLP NGQIPKVPFM DPGNEIFLRN  360
HQLQVQQQQQ HLGYPPGLQF LPQQKALSPK PKVVGLGGDE MTYHNPPQQH ALLDQLYKAA  420
ELVGTGNFSH AQGILARLNH QLSPVGKPLQ RAAFYFKEAL QLLLLMNNPV NPPPPRCPTP  480
FDVIFKMGAY KVFSEISPLI QFVNFTCNQA LLEALDDDDQ IHIVDFDIGF GAQWASFMQE  540
LSLRNRGAPS LKITAFASPS THHPIELGLM RENLTQFAND IGISFEFEVV NFDSLNQNSF  600
SLPFSRASEN EALAVNFPLW STSNQPALLP SLLRFIKQLS PKIVVSLDRG CDRSDLPFPQ  660
HLLQALQSYI NLLESLDAVN MNSDAVNKIE RFLLQPRIES TVLGRLRGPE RMPLWKTLFA  720
SAGYTPVTFS NFTETQAECV AKRTSVRGFH VEKRQASLVL CWQRRELISA SAWRC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00150.11e-116GRAS family protein