PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022154142.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MYB

Protein Properties

Length: 261aa MW: 30141.3 Da PI: 8.6635

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022154142.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	44	5e-14	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd +l + + G ++W+++++ g+ R++k+c++rw +yl XP_022154142.1 14 RGPWTVEEDHKLMNFILNNGIHCWRLVPKLAGLLRCGKSCRLRWINYL 61 89****************************99**********97 PP
2	Myb_DNA-binding	56.2	8.1e-18	67	110	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg++T+ E+ ++++++ +lG++ W++Ia++++ gRt++++k++w++ XP_022154142.1 67 RGAFTEMEENQIIHLHSLLGNR-WSKIAAHFP-GRTDNEIKNHWNT 110 89******************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 261 aa Download sequence
MGRQPCCDKV GLKRGPWTVE EDHKLMNFIL NNGIHCWRLV PKLAGLLRCG KSCRLRWINY 60 LRPDLKRGAF TEMEENQIIH LHSLLGNRWS KIAAHFPGRT DNEIKNHWNT RIKKRLKQLG 120 LDPLTHKKLT DKTDHRVKEK LFIASNPLRK QEAMPNFDFE TKEKNPFAAH MMSDGSSNLA 180 CKGFGYGKWT DQLENDMSFS FEYCSSSSES LSIIKENSLH FDGLDSLPSW DDGVPKFNQL 240 EEDDVYSLGN GNGYYINTFS R

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G14340.1	3e-82	MYB family protein