PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022154225.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family bHLH
Protein Properties Length: 371aa    MW: 40236.5 Da    PI: 9.5298
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022154225.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.88.3e-13299344655
                     HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +++Er RR ri +++ +L+el+P+     +k  + a++L +AveYIk+Lq
  XP_022154225.1 299 SIAERVRRTRISERMRKLQELVPNM----DKQTNTADMLDLAVEYIKELQ 344
                     689*********************7....688*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 371 aa     Download sequence    
MGSNTHQSFQ QPNSALLRFR SAPSSLFADF AHGVDSKRLN HFEGSESERF VSRFRGGGGG  60
GNSNDSESTA AGNYSSALPP HYPRHSSAVS SSSCSSSSAS SATTSSSSSS MSCSYGLLGS  120
NLARQNSSPP GVFSHLNQNG YGGRNFSRLS GSSNGGEVSP PSNRLNNSQI SFSSLLPSSL  180
GMLSQISEQV GSEKLANTNG EAQFFGSSGF PFASWNESSQ FSQAFPCVKC DPDPESNRKL  240
FSSNHQNGEI SNRVHLLSHH LSFPKNASDI ASIEKLLQLQ DSVPCRIRAK RGCATHPRSI  300
AERVRRTRIS ERMRKLQELV PNMDKQTNTA DMLDLAVEYI KELQKQFKTL SDNRTKCVCL  360
NMQKPVSNQI M
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42280.13e-77bHLH family protein