PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022154226.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MIKC_MADS

Protein Properties

Length: 211aa MW: 24899.5 Da PI: 8.9924

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022154226.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	90.1	1.1e-28	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien+snrqvt+skRrngi+KKA+E+ vLCda+v+++if+s+gk++ey+s XP_022154226.1 9 KRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAQVSLVIFASSGKMHEYCS 59 79***********************************************96 PP
2	K-box	90.1	4.2e-30	71	168	1	98
K-box 1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLr 95 y+k+sgk+l++ak+e+l++e++++kke++n+q e+Rhl Ged++sL++keL+ Le++Le++l+ +R+k++e+++++ + +++e+e+++ n +L XP_022154226.1 71 YHKQSGKRLWDAKHENLSNEMDRVKKENDNMQIELRHLRGEDITSLNYKELMALEEALENGLTGVREKQSEFIKMMRTNERMMEEENKRLNYELY 165 8999******************************************************************************************9 PP K-box 96 kkl 98 +k XP_022154226.1 166 QKE 168 996 PP

Sequence ? help Back to Top
Protein Sequence Length: 211 aa Download sequence
MGRGKIEIKR IENSSNRQVT YSKRRNGIIK KAKEITVLCD AQVSLVIFAS SGKMHEYCSP 60 STPLIDILDK YHKQSGKRLW DAKHENLSNE MDRVKKENDN MQIELRHLRG EDITSLNYKE 120 LMALEEALEN GLTGVREKQS EFIKMMRTNE RMMEEENKRL NYELYQKEMV AMGESVREMD 180 NGYNQRMRDF NSQMPFAFRV QPIQPNLQER I

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G20240.1	2e-86	MIKC_MADS family protein