PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022154288.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family NAC
Protein Properties Length: 156aa    MW: 18385 Da    PI: 8.7921
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022154288.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM73.55.3e-2321249128
             NAM   9 PtdeelvveyLkkkvegkkleleevikev...diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk..sgyWkatgkdkevlskkge 98 
                     P+deelv +yL++k+ ++++++ + ik++   ++++  P+ L    +++++ewyfF++  +   +++++ + +   +g+Wk  g + ++ s++ge
  XP_022154288.1   2 PSDEELVRDYLRNKILKNPIPA-DPIKDIqisELFQNPPNCLV-PRNSSDREWYFFIPLGEGFDQKTNEIQCVGngEGFWKFVGDSYPIRSTRGE 94 
                     9******************999.66777611256677888895.3456899********9988877777775433499***************** PP

             NAM  99 lvglkktLvfykgrapkgektdWvmheyrl 128
                     ++ lkk  v+++gr  k++kt+W m+ y+l
  XP_022154288.1  95 VIALKKESVYFRGRITKPKKTHWAMELYQL 124
                     **************************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 156 aa     Download sequence    
MPSDEELVRD YLRNKILKNP IPADPIKDIQ ISELFQNPPN CLVPRNSSDR EWYFFIPLGE  60
GFDQKTNEIQ CVGNGEGFWK FVGDSYPIRS TRGEVIALKK ESVYFRGRIT KPKKTHWAME  120
LYQLPLECWN NFKLNQQSVE RWSVIKIRRG KSYDPD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G39820.11e-17NAC family protein