PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022154304.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family C3H
Protein Properties Length: 164aa    MW: 18624.7 Da    PI: 9.4767
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022154304.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH37.25e-12326125
                    --S---SGGGGTS--TTTTT-SS-S CS
         zf-CCCH  1 yktelCrffartGtCkyGdrCkFaH 25
                    yk  lCr+f+r G CkyG+rC+++H
  XP_022154304.1  3 YKKDLCRNFQR-GSCKYGERCRYIH 26
                    99*********.************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 164 aa     Download sequence    
MQYKKDLCRN FQRGSCKYGE RCRYIHATQQ PQNSGSFGFG MQTSSQHQQK PNPFGFGVHS  60
TGQSKAAADF GSKQNQYKPF ENKWTRSSTP SGNAPSQKSD NQPPSANHKC TDGESCKCQI  120
VEDFQNERPL WKLTCYGHSK RNLESLFEYN FFKIASKIAS KDCI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75340.11e-34C3H family protein