PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022154413.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

NAC

Protein Properties

Length: 201aa MW: 23012.9 Da PI: 5.593

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022154413.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	111.8	7.5e-35	9	131	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrF Ptdeelvv++L++k++ +++ +vi+++d++ ++Pw+L+ k+ +e ++wyf+s++ + r+t++gyWk g+d++v+s+ XP_022154413.1 9 LPPGFRFYPTDEELVVHFLHRKAALLPCHP-DVIPDLDLFPYDPWELHGKALGEGNRWYFYSRKIE--------ARVTDNGYWKPLGRDEPVVSA 94 79***********************999.99**********977778899**9866........599************98 PP NAM 96 .kgelvglkktLvfy...kgrapkgektdWvmheyrl 128 ++ vg+kk +vf+ g a + kt+W+mhe+rl XP_022154413.1 95 aTSDIVGMKKYFVFHvgeVGAATGAAKTNWIMHEFRL 131 67778******66556788889*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 201 aa Download sequence
MGDHHNVNLP PGFRFYPTDE ELVVHFLHRK AALLPCHPDV IPDLDLFPYD PWELHGKALG 60 EGNRWYFYSR KIEARVTDNG YWKPLGRDEP VVSAATSDIV GMKKYFVFHV GEVGAATGAA 120 KTNWIMHEFR LCDGASSSTA AARSSKRRGR PKRDYSKWVL CRVYERDEEK EEEDGAELSC 180 LDEVFLTLDD LEEISLPNRI Q

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	147	154	RRGRPKRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64530.1	9e-74	NAC family protein