PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022154663.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

bHLH

Protein Properties

Length: 505aa MW: 56762.7 Da PI: 9.5616

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022154663.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.5	5e-13	280	324	5	54
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 h + ErrRR+++N++f+ Lr+llP++ +K +Ka++L + eY+ +L XP_022154663.1 280 HMISERRRRQKLNDSFQALRSLLPPP-----TKKDKASVLATTREYLTKL 324 7789********************.....9************9888 PP

Sequence ? help Back to Top
Protein Sequence Length: 505 aa Download sequence
MELDVVFSLD EGSRATFLRR LMHSFHCIYI CVWSHFPLSN CLLNLDRLYR EDDDDDDKQQ 60 ASSSLGSFDR RLFNDYTQLV FNVQNNLVPG HAFNNNISFL ELRESLLQTH ASYQIQRQFY 120 AAAGIKSSVF MGSSNGEIEL GFWQSEVNMV EKMKVISELI PRSWAEVASS SMAALENPPV 180 AVALTSSSSS SLKSPISTSM GSPETSCSLF QTDLSKILLQ PESAFKKYAK LAAPAPEDRG 240 RRQISMVKKW IMFYRNLNSM GITRQLATAS GRPASAQLLH MISERRRRQK LNDSFQALRS 300 LLPPPTKKDK ASVLATTREY LTKLKAQVSE LSHKNRMLLE AQPNNKQQAI TTSSSVNERF 360 TVRVSHAPAA DEAEKFFDLE ITVRSGEGLL MANVAIRVLQ FLRNAVDVGA VLSFRGDDTM 420 APSSSLSRLA FRFTLQGGEW DESAFVEAVR RIVSDVAPHK GKLNHNANIP FTRVIDDVPS 480 FPALDRRYFV NHVIMNTNIE FKKKS

Sequence ? help Back to Top

Protein Sequence Length: 505 aa Download sequence

MELDVVFSLD EGSRATFLRR LMHSFHCIYI CVWSHFPLSN CLLNLDRLYR EDDDDDDKQQ  60
ASSSLGSFDR RLFNDYTQLV FNVQNNLVPG HAFNNNISFL ELRESLLQTH ASYQIQRQFY  120
AAAGIKSSVF MGSSNGEIEL GFWQSEVNMV EKMKVISELI PRSWAEVASS SMAALENPPV  180
AVALTSSSSS SLKSPISTSM GSPETSCSLF QTDLSKILLQ PESAFKKYAK LAAPAPEDRG  240
RRQISMVKKW IMFYRNLNSM GITRQLATAS GRPASAQLLH MISERRRRQK LNDSFQALRS  300
LLPPPTKKDK ASVLATTREY LTKLKAQVSE LSHKNRMLLE AQPNNKQQAI TTSSSVNERF  360
TVRVSHAPAA DEAEKFFDLE ITVRSGEGLL MANVAIRVLQ FLRNAVDVGA VLSFRGDDTM  420
APSSSLSRLA FRFTLQGGEW DESAFVEAVR RIVSDVAPHK GKLNHNANIP FTRVIDDVPS  480
FPALDRRYFV NHVIMNTNIE FKKKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56960.1	2e-41	bHLH family protein