PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022154707.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family ARF
Protein Properties Length: 993aa    MW: 110258 Da    PI: 7.1082
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022154707.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B373.33e-23126227199
                     EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 
                     f+k+lt sd++++g +++p++ ae++      +++++  ++l+ +d++ +sW++++iyr++++r++lt+GW+ Fv+ ++L +gD+v+F   ++++
  XP_022154707.1 126 FCKTLTASDTSTHGGFSVPRRAAEKIfppldySMQPPA-QELVARDLHDNSWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFI--RDEK 217
                     99*****************************9545444.38************************************************..4567 PP

                     E..EEEEE-S CS
              B3  90 felvvkvfrk 99 
                      +l+++++r+
  XP_022154707.1 218 SQLLLGIRRA 227
                     7789999997 PP
2Auxin_resp124.19.5e-41252334183
      Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                     aahaa+++s+F+++YnPras+seFv++++k++ka++++vs+GmRf+m+fete+s  rr++Gt++g+sd+d++rW+nS+Wr+L+
  XP_022154707.1 252 AAHAAANNSPFTIFYNPRASPSEFVIPLAKYNKAMYTQVSLGMRFRMMFETEESGVRRYMGTITGISDMDSLRWKNSQWRNLQ 334
                     79*******************************************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 993 aa     Download sequence    
MKAPPNGFLA NSGEGERKNI NSELWHACAG PLVSLPPVGS LVVYFPQGHS EQVAASMNKE  60
TDFIPNYPNL PSKLICMLHN VTLHADPETD EVYAQMTLQP VTKYEKEALL ASDIGLKQNR  120
QPAEFFCKTL TASDTSTHGG FSVPRRAAEK IFPPLDYSMQ PPAQELVARD LHDNSWTFRH  180
IYRGQPKRHL LTTGWSVFVS TKRLFAGDSV LFIRDEKSQL LLGIRRANRQ QPALSSSVIS  240
SDSMHIGILA SAAHAAANNS PFTIFYNPRA SPSEFVIPLA KYNKAMYTQV SLGMRFRMMF  300
ETEESGVRRY MGTITGISDM DSLRWKNSQW RNLQVGWDES AAGERPNRVS IWEVEPVVTP  360
FYICPPPFFR PKFPKQPGMP DDESDIENAF KRAMPWFGDD FGLKDTPSSI FPGLSLVQWM  420
SMQHTNQFPA AQSGILPSMV APSALHGTLT NDDPSKLLSF QAPVLSSPNL QFSKANQQNQ  480
VGQLPPTTWS QQQQLQQLLQ VPASQQLQHQ QQLPPQQELQ QQQLQSQQLP QQQQLHSQQL  540
PQQPQRQQQT SPSALLNNGV SAANHLPNQS LQQPLVYSQL QQRQLLAGNI QSHQTSQPSN  600
KNSFQTTSLS QETQFQPQIE QQPSLLPRQQ QQQQTQFQQA PLQLLQQSLS QRPQQQPQVP  660
QFSQPIPSEQ LQLQLLQKLQ QQQQHQQQQP LLSPATSLLP PQLLQQQHVH QQNQQLPPLP  720
LSNQQQFNAN GGSFPTEKLN SNGFSSLGLM QSQQVPITQS HNQFKPTIRA YSGLTDGDAP  780
SCSTSPSTNN CQVSVSNLLN KNQQVAATLG GDSVVEPATN LAQELQSKPD LRIKPEFPNS  840
KGSDQLKYKG TVPDQLEASS SGTSYCLDAG TIQQTFPLPT CLDNDVQSHP RNNIPFSNSI  900
DGLAPDTLLS RGYDSQKDLQ NLLSNYGGGV PRDIETELST AAISSQSFGV PNLPFKPGCS  960
NDVNVNEAGA LSSGLWANHS QRMRTYTKID VST
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19220.10.0ARF family protein