PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022154799.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family C2H2
Protein Properties Length: 246aa    MW: 27542.2 Da    PI: 8.7895
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022154799.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.50.00044150171223
                     EETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   2 kCpdCgksFsrksnLkrHirtH 23 
                     kC++C k F++   L +H + +
  XP_022154799.1 150 KCEKCRKQFRSYKALFSHEKIC 171
                     7*****************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    
MGFAPSSSSY SSSADEKPAL YELRENPKRS LRFADPVFAF SHSEILVQDR ESETESKNPT  60
RKRSKRSPTP AAVDSPANSV SDTSPEEDVA MCLMMLSRDS WVGNEDQVQD RKPNGIPESE  120
SEPKSKSKSK SMEELGRNLK VMKLIRRKKK CEKCRKQFRS YKALFSHEKI CRPETELESG  180
RIFKCPFCLK LFGSGQALGG HKRSHLATST NGTVNVSVSL RLEISLIDLN LPAPVEEDDY  240
SVVSYA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60580.17e-28C2H2 family protein