PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022155032.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MIKC_MADS

Protein Properties

Length: 246aa MW: 28253.2 Da PI: 9.3566

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022155032.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	91.8	3.3e-29	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+ rqvtfskRr g+lKKA+E+SvLCda+va+i+fs++gkl+eys+ XP_022155032.1 9 KRIENKISRQVTFSKRRGGLLKKAHEISVLCDADVALIVFSTKGKLFEYST 59 79***********************************************96 PP
2	K-box	99	6.9e-33	85	175	10	100
K-box 10 eeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 +++++ s++qe+ kL +++e q+++R++lG+dL++L+l+eLq+LeqqL++slk+iR++Kn+l+ e+i+ l kke+elqeen++L +k++e XP_022155032.1 85 DSETQVSWCQEYPKLAARLEIVQKNLRNYLGQDLDPLNLRELQSLEQQLDSSLKRIRTRKNQLMQESISMLHKKERELQEENRQLANKVKE 175 5666789*********************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 246 aa Download sequence
MGRGRVQLKR IENKISRQVT FSKRRGGLLK KAHEISVLCD ADVALIVFST KGKLFEYSTD 60 SSMEKILERY ERYSYAERPF AGNADSETQV SWCQEYPKLA ARLEIVQKNL RNYLGQDLDP 120 LNLRELQSLE QQLDSSLKRI RTRKNQLMQE SISMLHKKER ELQEENRQLA NKVKENEKGM 180 AERGHCDLPT LVQNQPIFAM PPQLPLSIGG TLHERGGSGE DETRPTSANV QIPAWMLSHV 240 PERPHN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60910.1	4e-75	MIKC_MADS family protein