PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022155101.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

bHLH

Protein Properties

Length: 468aa MW: 51431.5 Da PI: 6.8872

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022155101.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	28.4	2.9e-09	290	337	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq XP_022155101.1 290 SHSLAERVRREKISERMKLLQDLVPGC----NKVTGKALMLDEIINYVQSLQ 337 8***********************9....677***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 468 aa Download sequence
MDNQFFLDAA GIPPSLLHSP MPAWQQQQLS SAMEVQLPEL NHCSSSHQSP DWDKSLPDRT 60 FHFDSALSSM VSSPAASNSN LTTDAFVIRE LIGKLAANSD ASPTLCNSST VAEFAADPGF 120 AERAARFSCF GSRSFNGRTA TATAKLTNEF ANYRSHLSIA DEKLSRVSSS PSLKALALGS 180 ETNLQEHKNN SPPLEEESSL SNPEKASSNP RKRKAVTKAA KLKEPVAEAA SPKKSKAAET 240 KEIVKSEEDS KKISDRNVAE EKQTKANSKP PEPPKDYIHV RARRGQATDS HSLAERVRRE 300 KISERMKLLQ DLVPGCNKVT GKALMLDEII NYVQSLQHQV EFLSMKLASV NTTTTRVDFN 360 VDSLLSKQMY QSSSSLTHAQ IRPIDSSAST FYGHQNPSLP TTSHSSVDPL DSVLCLNPFP 420 QNPPQYPSFG EDELQSIVQM GFLQNHTQEM SLQSHNFNLG SDQMKIEL

Sequence ? help Back to Top

Protein Sequence Length: 468 aa Download sequence

MDNQFFLDAA GIPPSLLHSP MPAWQQQQLS SAMEVQLPEL NHCSSSHQSP DWDKSLPDRT  60
FHFDSALSSM VSSPAASNSN LTTDAFVIRE LIGKLAANSD ASPTLCNSST VAEFAADPGF  120
AERAARFSCF GSRSFNGRTA TATAKLTNEF ANYRSHLSIA DEKLSRVSSS PSLKALALGS  180
ETNLQEHKNN SPPLEEESSL SNPEKASSNP RKRKAVTKAA KLKEPVAEAA SPKKSKAAET  240
KEIVKSEEDS KKISDRNVAE EKQTKANSKP PEPPKDYIHV RARRGQATDS HSLAERVRRE  300
KISERMKLLQ DLVPGCNKVT GKALMLDEII NYVQSLQHQV EFLSMKLASV NTTTTRVDFN  360
VDSLLSKQMY QSSSSLTHAQ IRPIDSSAST FYGHQNPSLP TTSHSSVDPL DSVLCLNPFP  420
QNPPQYPSFG EDELQSIVQM GFLQNHTQEM SLQSHNFNLG SDQMKIEL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07340.1	3e-86	bHLH family protein