PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022155415.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MIKC_MADS

Protein Properties

Length: 241aa MW: 27678.1 Da PI: 10.3514

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022155415.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	78.7	4.2e-25	48	97	1	50
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krie++ nr+vtf+kRr g++KKA ELSvLCd+e ++if ++g+lye++ XP_022155415.1 48 KRIEDSCNRHVTFCKRRSGLIKKARELSVLCDVELGLLIFTNRGRLYEFC 97 79***********************************************8 PP
2	K-box	16.9	2.6e-07	129	186	9	69
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskK 69 +++++++s q+ l L k ++++q ++ d ++L++ e++qLe+qLe l ki+ ++ XP_022155415.1 129 ASDQDHQSNQTILVSLGKLLQTIQ---SQVEEPDFKKLNVTEMMQLENQLEATLDKIKIQR 186 455555555555555555555555...568889************************8655 PP

Sequence ? help Back to Top
Protein Sequence Length: 241 aa Download sequence
MVIRLWKQKQ GEKKKSGLRL DGDKRRVEGK GIRVDSGAKM GRKKIEVKRI EDSCNRHVTF 60 CKRRSGLIKK ARELSVLCDV ELGLLIFTNR GRLYEFCRGN SLLNIIERYQ SHLKGKSQSQ 120 SPIDIDTNAS DQDHQSNQTI LVSLGKLLQT IQSQVEEPDF KKLNVTEMMQ LENQLEATLD 180 KIKIQRLYLA MSILLRKVEP KLHLGDQPPL EQRECWSGQS ASLSHLLHNA ALHILCQRRT 240 N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03710.3	2e-33	MIKC_MADS family protein