PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022155417.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MIKC_MADS

Protein Properties

Length: 198aa MW: 22848.4 Da PI: 9.9119

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022155417.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	79.2	3e-25	48	97	1	50
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krie++ nr+vtf+kRr g++KKA ELSvLCd+e ++if ++g+lye++ XP_022155417.1 48 KRIEDSCNRHVTFCKRRSGLIKKARELSVLCDVELGLLIFTNRGRLYEFC 97 79***********************************************8 PP
2	K-box	20.3	2.3e-08	129	192	9	75
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellle 75 +++++++s q+ l L k ++++q ++ d ++L++ e++qLe+qLe l ki+ ++ e ++e XP_022155417.1 129 ASDQDHQSNQTILVSLGKLLQTIQ---SQVEEPDFKKLNVTEMMQLENQLEATLDKIKIQRIEAMME 192 455556666665555555555555...558889****************************999987 PP

Sequence ? help Back to Top
Protein Sequence Length: 198 aa Download sequence
MVIRLWKQKQ GEKKKSGLRL DGDKRRVEGK GIRVDSGAKM GRKKIEVKRI EDSCNRHVTF 60 CKRRSGLIKK ARELSVLCDV ELGLLIFTNR GRLYEFCRGN SLLNIIERYQ SHLKGKSQSQ 120 SPIDIDTNAS DQDHQSNQTI LVSLGKLLQT IQSQVEEPDF KKLNVTEMMQ LENQLEATLD 180 KIKIQRIEAM MENDCWTD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03710.3	6e-35	MIKC_MADS family protein