PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022155588.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

bHLH

Protein Properties

Length: 616aa MW: 68385.4 Da PI: 7.1367

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022155588.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	23.4	1.1e-07	427	462	15	55
HHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 15 riNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 ++ ++f+ Lr++lP a +K++K++iL +veY+k+L+ XP_022155588.1 427 NLHHKFFILRSILPFA-----TKMDKVSILGDTVEYLKQLR 462 67789*********.....9***************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 616 aa Download sequence
MEEKGMEGLE LKGKLQLAAQ SVEWSYCVVW RLCTERGALV WGDGFYNGPI KTTKTLHSTP 60 TPTPSPSPSP SDLHALRTHQ LRDLYHSLST GTPSPSAALS PEDLTHLEWF YLLCISFSFP 120 PGIGLPGNAF SNNEHVWITA ANQIHTKIFS RALLAKSARI KTVVCIPLMD AVVELGTTNK 180 VKEDIGFVQH IKSIFAETQS VAPKPAVALS ELSTSNSAST SLEHYCCNII RRQEDDSPSS 240 VGVGEPSKSM QLELSEHIPL GSASPDNDXS NNTYFDAHFH PLPNSGHLLN NFDFEYRPPL 300 KHPPPPAAAM AMLTEEDTRY SSTVSAILQN QNQSISSAAN LTCSIQSAFS EWNRRSDVHH 360 VPLESTSTCT SQCLLKHILH IVPFLHAKHH HHQNPSKSCD GRWQKGTSQD QLSGNHFLAE 420 TLCHPENLHH KFFILRSILP FATKMDKVSI LGDTVEYLKQ LRQKIQDLEA QNRELEITKR 480 SGFEQLQRNA AAYQTRYDQP CSDKRKLRIL EGVGDGCIKH KVLNSPTSLD SNLQVSIIGS 540 EGLLELHCPY KEGLLLDILL ILQGLRIETT TVCSTLSHGV FIAELRAKVK ENADGKKASI 600 LEVKRAIQQI IPRTEN

Sequence ? help Back to Top

Protein Sequence Length: 616 aa Download sequence

MEEKGMEGLE LKGKLQLAAQ SVEWSYCVVW RLCTERGALV WGDGFYNGPI KTTKTLHSTP  60
TPTPSPSPSP SDLHALRTHQ LRDLYHSLST GTPSPSAALS PEDLTHLEWF YLLCISFSFP  120
PGIGLPGNAF SNNEHVWITA ANQIHTKIFS RALLAKSARI KTVVCIPLMD AVVELGTTNK  180
VKEDIGFVQH IKSIFAETQS VAPKPAVALS ELSTSNSAST SLEHYCCNII RRQEDDSPSS  240
VGVGEPSKSM QLELSEHIPL GSASPDNDXS NNTYFDAHFH PLPNSGHLLN NFDFEYRPPL  300
KHPPPPAAAM AMLTEEDTRY SSTVSAILQN QNQSISSAAN LTCSIQSAFS EWNRRSDVHH  360
VPLESTSTCT SQCLLKHILH IVPFLHAKHH HHQNPSKSCD GRWQKGTSQD QLSGNHFLAE  420
TLCHPENLHH KFFILRSILP FATKMDKVSI LGDTVEYLKQ LRQKIQDLEA QNRELEITKR  480
SGFEQLQRNA AAYQTRYDQP CSDKRKLRIL EGVGDGCIKH KVLNSPTSLD SNLQVSIIGS  540
EGLLELHCPY KEGLLLDILL ILQGLRIETT TVCSTLSHGV FIAELRAKVK ENADGKKASI  600
LEVKRAIQQI IPRTEN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G09820.1	5e-63	bHLH family protein