PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022155748.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family M-type_MADS
Protein Properties Length: 231aa    MW: 25533.2 Da    PI: 10.0499
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022155748.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF75.15.6e-241461249
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                    + e ks +qvtfskRr+g++KKA+ELSvLC+aeva+i+fs+++k++ +
  XP_022155748.1 14 KLEKKSSKQVTFSKRRTGLFKKASELSVLCGAEVAIIVFSPNDKVFCF 61
                    57899***************************************9866 PP
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    
MKKTQGRQKI EIKKLEKKSS KQVTFSKRRT GLFKKASELS VLCGAEVAII VFSPNDKVFC  60
FGHPNVDLLL DRFLTGNSAP PKPAESYVPV AQLNREFADA VRELEAEKRR AAEVIRAAEE  120
WRSGGGFWWE EEIEGMRVEE LKEFRSALQD LRAKVAERVE KLTAARIGGP PLPALPPPPA  180
TSSFQNHQFP PPTTSFNLAG NHQFPLTATS SFPVAGSQTT PFHLAGGLGF F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.13e-27M-type_MADS family protein