PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022155828.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

C2H2

Protein Properties

Length: 222aa MW: 24904.6 Da PI: 9.8229

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022155828.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	18.6	5e-06	78	100	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H XP_022155828.1 78 FVCEICNKGFQRDQNLQLHRRGH 100 89*******************88 PP
2	zf-C2H2	15.2	6.2e-05	154	176	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k++ +s+ k H +t+ XP_022155828.1 154 WKCEKCSKVYAVQSDWKAHSKTC 176 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 222 aa Download sequence
MFAATLSNST SLSEEASVSS GTRVQPADFS CLNPLLPTFS DHHPPLKVKK KRSLPGNPDP 60 DAEVIALSPK TLLATNRFVC EICNKGFQRD QNLQLHRRGH NLPWKLKQRN SKEVKKKAYV 120 CPEPTCVHHH PSRALGDLTG IKKHYCRKHG EKKWKCEKCS KVYAVQSDWK AHSKTCGTRE 180 YRCDCGTLFS RKDSFITHRA FCDALAEESA RLSANQLAMA AA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G03840.1	1e-115	C2H2 family protein