PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022155909.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

G2-like

Protein Properties

Length: 383aa MW: 41202.2 Da PI: 8.7092

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022155909.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	107.4	7.9e-34	42	96	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprl+Wtp+LH+rFveav+qLGG++kAtPkt++++m+++gLtl+h+kSHLQkYRl XP_022155909.1 42 KPRLKWTPDLHDRFVEAVNQLGGADKATPKTVMKIMGIPGLTLYHLKSHLQKYRL 96 79****************************************************8 PP
2	Myb_DNA-binding	63.1	5.3e-20	44	95	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r++WT+++++++v+av+qlGg t+kt+++ mg g+tl+++ks++qky+ XP_022155909.1 44 RLKWTPDLHDRFVEAVNQLGGAdkaTPKTVMKIMGiPGLTLYHLKSHLQKYR 95 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 383 aa Download sequence
MYHHQHRPGA GKSMQSSERH LFLQGGNGPG GDSGLVLSTD AKPRLKWTPD LHDRFVEAVN 60 QLGGADKATP KTVMKIMGIP GLTLYHLKSH LQKYRLSKNL QGQANGGNGS NKTGSVAVSG 120 DQRLAEPNGP TRTTTNILVA PHSNNKSLQI SETIQMQIEV QKRLHEQLEV QRHLQLRIEA 180 QGKYLQTVLE KAQETLGRQN LGTVGLEAAK VQLSELVSKV STQCLTAAFP ELHQGQGQAQ 240 RLGPQQTQPQ DCSMDSCLTS CEGTSSKDQD QLLLHTSHLA LRPYNVPAPG PASLLASTAG 300 DNHHGGLSMS IGGVLQGEKG DGYNGRMLNN SSKRKEVGAG AERYRMAAVA PSSLDLNAGD 360 DQLSNNDHVS STNCKMFDLN GFS

Sequence ? help Back to Top

Protein Sequence Length: 383 aa Download sequence

MYHHQHRPGA GKSMQSSERH LFLQGGNGPG GDSGLVLSTD AKPRLKWTPD LHDRFVEAVN  60
QLGGADKATP KTVMKIMGIP GLTLYHLKSH LQKYRLSKNL QGQANGGNGS NKTGSVAVSG  120
DQRLAEPNGP TRTTTNILVA PHSNNKSLQI SETIQMQIEV QKRLHEQLEV QRHLQLRIEA  180
QGKYLQTVLE KAQETLGRQN LGTVGLEAAK VQLSELVSKV STQCLTAAFP ELHQGQGQAQ  240
RLGPQQTQPQ DCSMDSCLTS CEGTSSKDQD QLLLHTSHLA LRPYNVPAPG PASLLASTAG  300
DNHHGGLSMS IGGVLQGEKG DGYNGRMLNN SSKRKEVGAG AERYRMAAVA PSSLDLNAGD  360
DQLSNNDHVS STNCKMFDLN GFS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04030.3	1e-110	G2-like family protein