PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022156144.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family M-type_MADS
Protein Properties Length: 271aa    MW: 30087.8 Da    PI: 10.0527
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022156144.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF73.61.6e-231461249
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                    + e ks +qvtfskRr+g++KKA ELSvLC++++a+++fs++gk++ +
  XP_022156144.1 14 KLEKKSSKQVTFSKRRTGLFKKAAELSVLCGVDIAIVVFSPNGKVFSF 61
                    57899****************************************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
MKKTLGRQKI EIKKLEKKSS KQVTFSKRRT GLFKKAAELS VLCGVDIAIV VFSPNGKVFS  60
FGHPNVDVLF DRFLTGNLAP PQPVERYVPV EELNREFADA ERELEVQKRR AAEESRSSGG  120
FWWEEPMEGM RLEELKEFRS ALQDLRAKVE ERVEKLTAVR IGGPLSPPPA TPFHLAGNHQ  180
FPPPTKSSQF LPLSPPLPPP PATSFHLAGN HQFPPPPPTT PFRLAGGRGR LPLTAPFNLA  240
ANCQCLPPPL MMPFHLAGNQ DVATALEFFL A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.19e-36M-type_MADS family protein