PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022156145.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family HD-ZIP
Protein Properties Length: 572aa    MW: 62281.8 Da    PI: 5.6843
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022156145.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox65.76.4e-21122177156
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     +++ +++t++q++eLe++F+++++p++++r eL+++l L++rqVk+WFqNrR+++k
  XP_022156145.1 122 KKRYHRHTPQQIQELEAVFKECPHPDEKQRLELSRRLCLETRQVKFWFQNRRTQMK 177
                     688999***********************************************999 PP
2START212.81.3e-663265511206
                     HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEE CS
           START   1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetl 82 
                     ela++a++elvk+a+ +ep+W  s     e++n++e++++f++  +     + +ea+r++g+v+ ++  lve+l+d++ +W e+++    + +t+
  XP_022156145.1 326 ELALAAMDELVKMAQTDEPLWIGSLeggrEILNQEEYMRTFTPCIGlkpngFVTEASRETGMVIINSLALVETLMDSN-RWAEMFPcmiaRTTTT 419
                     5899**************************************99999*9*9***************************.**************** PP

                     EEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--..-TTSEE-EESSEEEEEEEECTCEEEEEEEE- CS
           START  83 evissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe.sssvvRaellpSgiliepksnghskvtwveh 169
                     +vis g      galqlm aelq+lsplvp R++ f+R+++q+ +g+w++vd+S+d  ++ p   ss++ +++lpSg+++++++ng+skvtwveh
  XP_022156145.1 420 DVISGGmggtrnGALQLMHAELQVLSPLVPvREVNFLRFCKQHAEGVWAVVDISIDAMRDTPAgASSFINCRRLPSGCVVQDMPNGYSKVTWVEH 514
                     *********************************************************************************************** PP

                     EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 170 vdlkgrlphwllrslvksglaegaktwvatlqrqcek 206
                     ++++++++h+l+r+l++sg+ +ga++wvatlqrqce+
  XP_022156145.1 515 AEYEESQVHQLYRPLLSSGMGFGAQRWVATLQRQCEC 551
                     ***********************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 572 aa     Download sequence    
MSFGGFLDGG GGGGGGGGAR IVADLPYTNN SGGGGNMPSG AIAPPRLITQ SLTKSMFNSP  60
GLSLALTNMD GQGDLAGRMP EGLEHNVGRR TREEEHESRS GSDNMDGGSG DDQDAADNPP  120
RKKRYHRHTP QQIQELEAVF KECPHPDEKQ RLELSRRLCL ETRQVKFWFQ NRRTQMKTQL  180
ERHENTLLRQ ENDKLRAENM SIRDAMRNPI CSNCGGPAII GEISLEEQQL RIENARLKDE  240
LDRVCALAGK FLGRPISSLA NSIAPPLPSS SLELGVGSNG FGSLTMATTM PIGPDFGGGL  300
SGNLAVVPPP GRPTPGLGLE RSMLLELALA AMDELVKMAQ TDEPLWIGSL EGGREILNQE  360
EYMRTFTPCI GLKPNGFVTE ASRETGMVII NSLALVETLM DSNRWAEMFP CMIARTTTTD  420
VISGGMGGTR NGALQLMHAE LQVLSPLVPV REVNFLRFCK QHAEGVWAVV DISIDAMRDT  480
PAGASSFINC RRLPSGCVVQ DMPNGYSKVT WVEHAEYEES QVHQLYRPLL SSGMGFGAQR  540
WVATLQRQCE CLAILMSSAV PIRDHTGMSF IF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00730.20.0HD-ZIP family protein