PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022156217.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family MIKC_MADS
Protein Properties Length: 213aa    MW: 24644.3 Da    PI: 8.0392
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022156217.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF96.98.5e-31959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    krien + rqvtfskRrng+lKKA+ELSvLCdaeva+iifs++gklye+ss
  XP_022156217.1  9 KRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSS 59
                    79***********************************************96 PP
2K-box69.11.4e-23871721298
           K-box  12 akaeslqqela..kLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 
                         +l++e++   + k++e L+  +R+llG++L+ +s++eLqqLe+qLe+sl+kiRs+K+++l+e+i +l++ ek+l een aL kk+
  XP_022156217.1  87 V---QLEKEYDsfSMTKKLEHLEVCKRKLLGDGLDLCSIEELQQLERQLERSLSKIRSRKYQMLKEEIVKLKEEEKMLLEENAALLKKV 172
                     3...344444422689**********************************************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    
MVRGKTEMKR IENATSRQVT FSKRRNGLLK KAFELSVLCD AEVALIIFSP RGKLYEFSSS  60
SINKTIDRYQ NRTKELMSSS NTALEDVQLE KEYDSFSMTK KLEHLEVCKR KLLGDGLDLC  120
SIEELQQLER QLERSLSKIR SRKYQMLKEE IVKLKEEEKM LLEENAALLK KVGTESEQRA  180
EAKQRSEGHQ EIMEVETELF IGPPESRSSN GFL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G22950.13e-61MIKC_MADS family protein