PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022156472.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family YABBY
Protein Properties Length: 232aa    MW: 25722.3 Da    PI: 8.5139
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022156472.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY227.33.9e-70261942170
           YABBY   2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqlla.aeshldeslkeelleelkveeenlksnvekeesasts 95 
                     ++  ++eq+Cyv+Cn C+t+lavsvP +slfk+vtvrCGhCt+ll vn++      +   ++l++s+  +  ++   +  + +sn   ++ a t+
  XP_022156472.1  26 HHLPAAEQLCYVHCNICDTVLAVSVPCSSLFKTVTVRCGHCTNLLPVNMRGLLLPSTnQFHQLGHSFFSPSSHNILENIPTPNSNFLINQFAATN 120
                     577899****************************************8877665433303345777776664444444444444444333333333 PP

           YABBY  96 vsseklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170
                     +   + s+  ++e+pr+p ++rPPekrqrvPsaynrfik+eiqrik+ nPdishreafsaaaknWahfP+ihfgl
  XP_022156472.1 121 NFG-MPSRGVTDELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAKNWAHFPHIHFGL 194
                     322.23788999****999******************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    
MSSSSSSPTP PPCHPLPPPP PPPLDHHLPA AEQLCYVHCN ICDTVLAVSV PCSSLFKTVT  60
VRCGHCTNLL PVNMRGLLLP STNQFHQLGH SFFSPSSHNI LENIPTPNSN FLINQFAATN  120
NFGMPSRGVT DELPRPPVIN RPPEKRQRVP SAYNRFIKDE IQRIKSVNPD ISHREAFSAA  180
AKNWAHFPHI HFGLMPDQTV KKTNIRQQEG DQNVLMKDNG FYASANVGVS HF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45190.11e-80YABBY family protein