PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022156500.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family NAC
Protein Properties Length: 239aa    MW: 26807.4 Da    PI: 9.5754
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022156500.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM95.49.1e-30101291128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lp+G+rF Ptdeel+++yLk+kv + +l++ +vi+++d++ ++Pw Lp  +   +++ +fF+k+++        +r++ +g+Wk+ gk+k +ls+
  XP_022156500.1  10 LPVGYRFCPTDEELLQHYLKRKVFHLPLPA-SVIPHFDVFLTDPWALPGDL---KEKRFFFTKQKSF------LKRSAGTGIWKSIGKEKFILSQ 94 
                     799***************************.99***************544...3467888887665......5788999**************9 PP

             NAM  96 .kgelvglkktLvfykg.rapkgektdWvmheyrl 128
                      +++l glkk+Lvf +   +++++ ++Wvmheyrl
  XP_022156500.1  95 gTNHLLGLKKSLVFSESkVSERTRPARWVMHEYRL 129
                     66778**********762455667899******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    
MDNTNGGIRL PVGYRFCPTD EELLQHYLKR KVFHLPLPAS VIPHFDVFLT DPWALPGDLK  60
EKRFFFTKQK SFLKRSAGTG IWKSIGKEKF ILSQGTNHLL GLKKSLVFSE SKVSERTRPA  120
RWVMHEYRLA RSGTTPNSTQ QIEKGDWAVY CLFQKRRRPK KQGVEEKQRL AVAQASVLDL  180
TVEDDGWEFP QPCSSCSSGV TEVSSNGTES MDQEESSGSG SGYGFGLPSY SSVAHVRGV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1154161QKRRRPKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.19e-40NAC family protein