PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022156527.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

WRKY

Protein Properties

Length: 196aa MW: 21762.4 Da PI: 8.5783

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022156527.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	104.3	6.6e-33	116	174	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK vk+++fprsYYrCt++gC+vkk+v+r ++d+ vv++tYeg H+h+ XP_022156527.1 116 LDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTRDEGVVVTTYEGMHTHP 174 59********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 196 aa Download sequence
MENYQMFFPC PGGALPPYHP DLPSAMDAAA AASPVFAGFH GGDLRSGGFL GLKTEVDAAA 60 AAMAVVDADG NGSENYQISC DGGHEEGEVK LSKKKGEKKV RKPRYAFQTR SQVDILDDGY 120 RWRKYGQKAV KNNKFPRSYY RCTHQGCNVK KQVQRLTRDE GVVVTTYEGM HTHPSDKPSD 180 NFEQILSRMQ IYSTPF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13080.1	1e-53	WRKY family protein