PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022156620.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family HD-ZIP
Protein Properties Length: 237aa    MW: 27554.8 Da    PI: 5.0483
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022156620.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox54.71.7e-1763113656
                     S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     ++  +q+++Le++Fe ++++  +++ ++A++l+L+ rqV++WFqNrRa++k
  XP_022156620.1  63 RLRLDQVKALERHFEVENKLEPDRKLKIAAELELEPRQVTIWFQNRRARWK 113
                     56779*********************************************9 PP
2HD-ZIP_I/II118.14.9e-3859151193
     HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 
                     e+krrl  +qvk+LE++Fe e+kLep+rK ++a eL+l+prqv +WFqnrRAR+ktkqlE+dy +Lk +ydalk + + Lek++++L+++l+e
  XP_022156620.1  59 ERKRRLRLDQVKALERHFEVENKLEPDRKLKIAAELELEPRQVTIWFQNRRARWKTKQLERDYGVLKVNYDALKLDYDVLEKQNTSLASKLRE 151
                     69**************************************************************************************99986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MKRFGHSESL DSFISIFSPK EQPSSTTAGG YSKEFQAMLD SLEEEENSED GGGGGPAPER  60
KRRLRLDQVK ALERHFEVEN KLEPDRKLKI AAELELEPRQ VTIWFQNRRA RWKTKQLERD  120
YGVLKVNYDA LKLDYDVLEK QNTSLASKLR ELREKVSRES EEMKIQREFT AIDNCSATSM  180
MNCFEISNQR EFMKATNEEQ SLFNAEETCN FCSVDQAPSL HWGTVEEQRR RSLEITI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15964ERKRRL
26089RKRRLRLDQVKALERHFEVENKLEPDRKLK
3108116RRARWKTKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65310.13e-47HD-ZIP family protein