PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022156666.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family NAC
Protein Properties Length: 207aa    MW: 23806.6 Da    PI: 4.7121
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022156666.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM83.44.6e-26121401128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleev..ikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 
                     lppG+rF P+de+lv ++L +k++ ++++ +++  i++++++ ++Pw+++ k+++++ +  yfFs+  +      +++ at++gyWk    d+++
  XP_022156666.1  12 LPPGLRFCPSDEDLVLHFLYHKASLSPTDHFSIsfIPHLQLHLYNPWQFHgKALSNGANVHYFFSTVTEL-----ESRSATENGYWKDVLMDEPI 101
                     79**********************99966555345**************955666666667888877654.....455699************** PP

             NAM  93 lsk.kgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                     +++ +g +vg+kk  +f+  +g ++ + +t+Wvm+eyr+
  XP_022156666.1 102 VCSgSGDEVGIKKYHIFFvrDGPTKAAIQTNWVMQEYRI 140
                     *9977888******99997667788889*********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    
MEANSGNRVS FLPPGLRFCP SDEDLVLHFL YHKASLSPTD HFSISFIPHL QLHLYNPWQF  60
HGKALSNGAN VHYFFSTVTE LESRSATENG YWKDVLMDEP IVCSGSGDEV GIKKYHIFFV  120
RDGPTKAAIQ TNWVMQEYRI YTYLLSTHGP SQNVLPKTKS DFGLWVLCRV FEAKENGERS  180
IFSYEEDEDN ESELSYLDEM YLSLDDI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64530.19e-42NAC family protein