PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022156671.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MYB

Protein Properties

Length: 198aa MW: 23101 Da PI: 10.6108

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022156671.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.3	2.7e-16	18	63	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed++l ++v+q+G +W+ Ia+++ R++k+c++rw++ XP_022156671.1 18 RGHWRPAEDDKLRRLVEQYGHQNWNFIAEHFE-SRSGKSCRLRWYNQ 63 899***************************.**********96 PP
2	Myb_DNA-binding	53.4	6.1e-17	70	113	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 ++++T+eE+e+l+ + +++G++ W++Iar++ gRt++ +k++++ XP_022156671.1 70 KDPFTEEEEERLLMYQQLHGNK-WALIARHFK-GRTDNAVKNHFHV 113 689*****************.****9.********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 198 aa Download sequence
MVRSSSSSGG SGGGSCYRGH WRPAEDDKLR RLVEQYGHQN WNFIAEHFES RSGKSCRLRW 60 YNQLDPSINK DPFTEEEEER LLMYQQLHGN KWALIARHFK GRTDNAVKNH FHVIMARRRR 120 ERFTIFSNNN NLNNKQQRLL RTLIPSKNNF PNHLHHHNVV KWTPLAAAPP AATAPEGEEE 180 EKKKRVPFID FLGMGSSR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G33450.1	1e-58	MYB family protein